Plots
Significance flagged (red label on bar) if genome-wide adjusted p-value < 0.1 and fold change magnitude >1.5. Dashed line at fold change 1.5 (in log scale).
Classifications and expression difference quantifications
Inheritance mode
from comparing F1s and parental strains' expression levelsRegulatory divergence classification
from comparing differential expression between strains and between alleles (ASE) in F1Differential expression testing results (among-allele and among-genotype)
Other
Further characteristics of this gene for aiding in interpretation
RNA and DNA alignment-related metrics
Differences from the reference genome and nucleotide diversity
Tools and resources
About
This (Shiny) app written - and hopefully maintained - by Avery Davis Bell, NSF PRFB-funded postdoc in Annalise Paaby's lab. 2022.
This work is licensed under a Creative Commons Attribution 4.0 International License.