Expression across strains and alleles

Gene expression quantification per sample - total and per allele

Classifications and expression difference quantifications

Inheritance mode

from comparing F1s and parental strains' expression levels

Regulatory divergence classification

from comparing differential expression between strains and between alleles (ASE) in F1

Differential expression testing results (among-allele and among-genotype)

Download expression analysis results for this gene: allele vs allele and differential expression statistical test results and regulatory divergence and inheritance mode classifications for each strain at this gene

Other information

Further characteristics of this gene for aiding in interpretation

RNA and DNA alignment-related metrics

Differences from the reference genome and nucleotide diversity

Tools, resources, and references


This (Shiny) app written - and hopefully maintained - by Avery Davis Bell, postdoc in Annalise Paaby's lab. This work was supported in part by an NSF PRFB. 2024.