Gene expression in 5 C. elegans strains x 3 RNAi treatments


Differential expression testing

Look up differential expression between any two strain/treatment groups

Choose groups to compare:
Group 1
...vs...
Group 2
Results from this comparison:

Overall differences based on strain or strain:treatment interaction?

Strain differences in CTR condition?
(from likelihood ratio test)
Differences in RNAi response across strains?
(from likelihood ratio test of strain:treatment interaction)

Other

Genome characteristics of this gene for aiding in interpretation

Citations and resources


About

This (Shiny) app written - and hopefully maintained - by Avery Davis Bell, NSF PRFB-funded postdoc in Annalise Paaby's lab. 2022.