Gene expression in 5 C. elegans strains x 3 RNAi treatments

Differential expression testing

Look up differential expression between any two strain/treatment groups

Choose groups to compare:
Group 1
Group 2
Results from this comparison:

Overall differences based on strain or strain:treatment interaction?

Strain differences in CTR condition?
(from likelihood ratio test)
Differences in RNAi response across strains?
(from likelihood ratio test of strain:treatment interaction)


Genome characteristics of this gene for aiding in interpretation

Citations and resources


This (Shiny) app written - and hopefully maintained - by Avery Davis Bell, NSF PRFB-funded postdoc in Annalise Paaby's lab. Updated 2023. For methodological details, see the writeup at bioRxiv.